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Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845T) [electronic resource].

Published
Berkeley, Calif. : Lawrence Berkeley National Laboratory, 2009.
Oak Ridge, Tenn. : Distributed by the Office of Scientific and Technical Information, U.S. Dept. of Energy.
Additional Creators
Lawrence Berkeley National Laboratory and United States. Department of Energy. Office of Scientific and Technical Information
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Summary
Capnocytophaga ochracea (Prevot et al. 1956) Leadbetter et al. 1982 is the type species of the genus Capnocytophaga. It is of interest because of its location in the Flavobacteriaceae, a genomically yet uncharted family within the order Flavobacteriales. The species grows as fusiform to rod shaped cells which tend to form clumps and are able to move by gliding. C. ochracea is known as a capnophilic organism with the ability to grow under anaerobic as well as under aerobic conditions (oxygen concentration larger than 15percent), here only in the presence of 5percent CO2. Strain VPI 2845T, the type strain of the species, is portrayed in this report as a gliding, Gram-negative bacterium, originally isolated from a human oral cavity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the flavobacterial genus Capnocytophaga, and the 2,612,925 bp long single replicon genome with its 2193 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Report Numbers
E 1.99:lbnl-2780e
lbnl-2780e
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Note
Published through SciTech Connect.
05/20/2009.
"lbnl-2780e"
Standards in Genomic Sciences FT
Mavromatis, Konstantinos; Ivanova, Natalia; Land, Miriam; Lapidus, Alla; Lucas, Susan; Copeland, Alex; Kyrpides, Nikos C.; Cheng, Jan-Fang; Chen, Feng; Bristow, James; Hugenholtz, Philip; Detter, John C.; Hauser, Loren; Nolan, Matt; Pitluck, Sam; Bruce, David; Han, Cliff; Goodwin, Lynne; Saunders, Elizabeth; Chain, Patrick; Brettin, Thomas; Markowitz, Victor; Palaniappan, Krishna; Chang, Yun-Juan; Eisen, Jonathan A.; Pati, Amrita; Goker, Markus; Rohde, Manfred; Glavina Del Rio, Tijana; Chen, Amy; Jefferies, Cynthia C.; Klenk, Hans-Peter; Gronow, Sabine; Tice1, Hope.
Genomics Division
Funding Information
DE-AC02-05CH11231
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